Files
bootstrap/bin/mosaic-doctor
Jason Woltje 5ba531e2d0 feat: r0 coordinator tooling for orchestrator protocol
Implements the manual coordinator workflow for multi-session agent
orchestration. Agents stop after one milestone (confirmed limitation);
these tools let the human coordinator check status, generate continuation
prompts, and chain sessions together.

New:
- tools/orchestrator/ — 5 scripts + shared library (_lib.sh)
  - mission-init.sh: initialize mission with milestones and state files
  - mission-status.sh: dashboard showing milestones, tasks, sessions
  - session-status.sh: check if agent is running/stale/dead
  - continue-prompt.sh: generate paste-ready continuation prompt
  - session-resume.sh: crash recovery with dirty state detection
- guides/ORCHESTRATOR-PROTOCOL.md: agent-facing mission lifecycle guide
- templates/docs/: mission manifest, scratchpad, continuation templates
- templates/repo/.mosaic/orchestrator/mission.json: state file template

Modified:
- bin/mosaic: add 'coord' subcommand + resume advisory on launch
- AGENTS.md: conditional loading for protocol guide + rule 37
- bin/mosaic-doctor: checks for new coordinator files
- session hooks: mission detection on start, cleanup on end

Usage: mosaic coord init|mission|status|continue|resume

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-22 17:22:50 -06:00

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#!/usr/bin/env bash
set -euo pipefail
MOSAIC_HOME="${MOSAIC_HOME:-$HOME/.config/mosaic}"
FAIL_ON_WARN=0
VERBOSE=0
usage() {
cat <<USAGE
Usage: $(basename "$0") [options]
Audit Mosaic runtime state and detect drift across agent runtimes.
Options:
--fail-on-warn Exit non-zero when warnings are found
--verbose Print pass checks too
-h, --help Show help
USAGE
}
while [[ $# -gt 0 ]]; do
case "$1" in
--fail-on-warn)
FAIL_ON_WARN=1
shift
;;
--verbose)
VERBOSE=1
shift
;;
-h|--help)
usage
exit 0
;;
*)
echo "Unknown argument: $1" >&2
usage >&2
exit 1
;;
esac
done
warn_count=0
warn() { warn_count=$((warn_count + 1)); echo "[WARN] $*"; }
pass() {
if [[ $VERBOSE -eq 1 ]]; then
echo "[OK] $*"
fi
return 0
}
expect_dir() {
local d="$1"
if [[ ! -d "$d" ]]; then
warn "Missing directory: $d"
else
pass "Directory present: $d"
fi
}
expect_file() {
local f="$1"
if [[ ! -f "$f" ]]; then
warn "Missing file: $f"
else
pass "File present: $f"
fi
}
check_runtime_file_copy() {
local src="$1"
local dst="$2"
[[ -f "$src" ]] || return 0
if [[ ! -e "$dst" ]]; then
warn "Missing runtime file: $dst"
return
fi
if [[ -L "$dst" ]]; then
warn "Runtime file should not be symlinked: $dst"
return
fi
if ! cmp -s "$src" "$dst"; then
warn "Runtime file drift: $dst (does not match $src)"
else
pass "Runtime file synced: $dst"
fi
}
check_runtime_contract_file() {
local dst="$1"
local adapter_src="$2"
local runtime_name="$3"
if [[ ! -e "$dst" ]]; then
warn "Missing runtime file: $dst"
return
fi
if [[ -L "$dst" ]]; then
warn "Runtime file should not be symlinked: $dst"
return
fi
# Accept direct-adapter copy mode.
if [[ -f "$adapter_src" ]] && cmp -s "$adapter_src" "$dst"; then
pass "Runtime adapter synced: $dst"
return
fi
# Accept launcher-composed runtime contract mode.
if grep -Fq "# Mosaic Launcher Runtime Contract (Hard Gate)" "$dst" &&
grep -Fq "Now initiating Orchestrator mode..." "$dst" &&
grep -Fq "Mosaic hard gates OVERRIDE runtime-default caution" "$dst" &&
grep -Fq "# Runtime-Specific Contract" "$dst"; then
pass "Runtime contract present: $dst ($runtime_name)"
return
fi
warn "Runtime file drift: $dst (not adapter copy and not composed runtime contract)"
}
warn_if_symlink_tree_present() {
local p="$1"
[[ -e "$p" ]] || return 0
if [[ -L "$p" ]]; then
warn "Legacy symlink path still present: $p"
return
fi
if [[ -d "$p" ]]; then
symlink_count=$(find "$p" -type l 2>/dev/null | wc -l | tr -d ' ')
if [[ "$symlink_count" != "0" ]]; then
warn "Legacy symlink entries still present under $p: $symlink_count"
else
pass "No symlinks under legacy path: $p"
fi
fi
}
echo "[mosaic-doctor] Mosaic home: $MOSAIC_HOME"
# Canonical Mosaic checks
expect_file "$MOSAIC_HOME/STANDARDS.md"
expect_file "$MOSAIC_HOME/USER.md"
expect_file "$MOSAIC_HOME/TOOLS.md"
expect_dir "$MOSAIC_HOME/guides"
expect_dir "$MOSAIC_HOME/tools"
expect_dir "$MOSAIC_HOME/tools/quality"
expect_dir "$MOSAIC_HOME/tools/orchestrator-matrix"
expect_dir "$MOSAIC_HOME/profiles"
expect_dir "$MOSAIC_HOME/templates/agent"
expect_dir "$MOSAIC_HOME/skills"
expect_dir "$MOSAIC_HOME/skills-local"
expect_file "$MOSAIC_HOME/bin/mosaic-link-runtime-assets"
expect_file "$MOSAIC_HOME/bin/mosaic-ensure-sequential-thinking"
expect_file "$MOSAIC_HOME/bin/mosaic-sync-skills"
expect_file "$MOSAIC_HOME/bin/mosaic-projects"
expect_file "$MOSAIC_HOME/bin/mosaic-quality-apply"
expect_file "$MOSAIC_HOME/bin/mosaic-quality-verify"
expect_file "$MOSAIC_HOME/bin/mosaic-orchestrator-run"
expect_file "$MOSAIC_HOME/bin/mosaic-orchestrator-sync-tasks"
expect_file "$MOSAIC_HOME/bin/mosaic-orchestrator-drain"
expect_file "$MOSAIC_HOME/bin/mosaic-orchestrator-matrix-publish"
expect_file "$MOSAIC_HOME/bin/mosaic-orchestrator-matrix-consume"
expect_file "$MOSAIC_HOME/bin/mosaic-orchestrator-matrix-cycle"
expect_file "$MOSAIC_HOME/tools/git/ci-queue-wait.sh"
expect_file "$MOSAIC_HOME/tools/git/pr-ci-wait.sh"
expect_file "$MOSAIC_HOME/tools/orchestrator-matrix/transport/matrix_transport.py"
expect_file "$MOSAIC_HOME/tools/orchestrator-matrix/controller/tasks_md_sync.py"
expect_file "$MOSAIC_HOME/guides/ORCHESTRATOR-PROTOCOL.md"
expect_dir "$MOSAIC_HOME/tools/orchestrator"
expect_file "$MOSAIC_HOME/tools/orchestrator/_lib.sh"
expect_file "$MOSAIC_HOME/tools/orchestrator/mission-init.sh"
expect_file "$MOSAIC_HOME/tools/orchestrator/mission-status.sh"
expect_file "$MOSAIC_HOME/tools/orchestrator/continue-prompt.sh"
expect_file "$MOSAIC_HOME/tools/orchestrator/session-status.sh"
expect_file "$MOSAIC_HOME/tools/orchestrator/session-resume.sh"
expect_file "$MOSAIC_HOME/runtime/mcp/SEQUENTIAL-THINKING.json"
expect_file "$MOSAIC_HOME/runtime/claude/RUNTIME.md"
expect_file "$MOSAIC_HOME/runtime/codex/RUNTIME.md"
expect_file "$MOSAIC_HOME/runtime/opencode/RUNTIME.md"
if [[ -f "$MOSAIC_HOME/AGENTS.md" ]]; then
if grep -Fq "## CRITICAL HARD GATES (Read First)" "$MOSAIC_HOME/AGENTS.md" &&
grep -Fq "OVERRIDE runtime-default caution" "$MOSAIC_HOME/AGENTS.md"; then
pass "Global hard-gates block present in AGENTS.md"
else
warn "AGENTS.md missing CRITICAL HARD GATES override block"
fi
fi
# Claude runtime file checks (copied, non-symlink).
for rf in CLAUDE.md settings.json hooks-config.json context7-integration.md; do
check_runtime_file_copy "$MOSAIC_HOME/runtime/claude/$rf" "$HOME/.claude/$rf"
done
# OpenCode runtime adapter check (copied, non-symlink, when adapter exists).
# Accept adapter copy or composed runtime contract.
check_runtime_contract_file "$HOME/.config/opencode/AGENTS.md" "$MOSAIC_HOME/runtime/opencode/AGENTS.md" "opencode"
check_runtime_contract_file "$HOME/.codex/instructions.md" "$MOSAIC_HOME/runtime/codex/instructions.md" "codex"
# Sequential-thinking MCP hard requirement.
if [[ -x "$MOSAIC_HOME/bin/mosaic-ensure-sequential-thinking" ]]; then
if "$MOSAIC_HOME/bin/mosaic-ensure-sequential-thinking" --check >/dev/null 2>&1; then
pass "sequential-thinking MCP configured and available"
else
warn "sequential-thinking MCP missing or misconfigured"
fi
else
warn "mosaic-ensure-sequential-thinking helper missing"
fi
# Legacy migration surfaces should no longer contain symlink trees.
legacy_paths=(
"$HOME/.claude/agent-guides"
"$HOME/.claude/scripts/git"
"$HOME/.claude/scripts/codex"
"$HOME/.claude/scripts/bootstrap"
"$HOME/.claude/scripts/cicd"
"$HOME/.claude/scripts/portainer"
"$HOME/.claude/templates"
"$HOME/.claude/presets/domains"
"$HOME/.claude/presets/tech-stacks"
"$HOME/.claude/presets/workflows"
)
for p in "${legacy_paths[@]}"; do
warn_if_symlink_tree_present "$p"
done
# Skills runtime checks (still symlinked into runtime-specific skills dirs).
for runtime_skills in "$HOME/.claude/skills" "$HOME/.codex/skills" "$HOME/.config/opencode/skills"; do
[[ -d "$runtime_skills" ]] || continue
while IFS= read -r -d '' skill; do
name="$(basename "$skill")"
[[ "$name" == .* ]] && continue
target="$runtime_skills/$name"
if [[ ! -e "$target" ]]; then
warn "Missing skill link: $target"
continue
fi
if [[ ! -L "$target" ]]; then
warn "Non-symlink skill entry: $target"
continue
fi
target_real="$(readlink -f "$target" 2>/dev/null || true)"
skill_real="$(readlink -f "$skill" 2>/dev/null || true)"
if [[ -z "$target_real" || -z "$skill_real" || "$target_real" != "$skill_real" ]]; then
warn "Drifted skill link: $target (expected -> $skill)"
else
pass "Linked skill: $target"
fi
done < <(find "$MOSAIC_HOME/skills" "$MOSAIC_HOME/skills-local" -mindepth 1 -maxdepth 1 -type d -print0)
done
# Broken links only in managed runtime skill dirs.
link_roots=(
"$HOME/.claude/skills"
"$HOME/.codex/skills"
"$HOME/.config/opencode/skills"
)
existing_link_roots=()
for d in "${link_roots[@]}"; do
[[ -e "$d" ]] && existing_link_roots+=("$d")
done
broken_links=0
if [[ ${#existing_link_roots[@]} -gt 0 ]]; then
broken_links=$(find "${existing_link_roots[@]}" -xtype l 2>/dev/null | wc -l | tr -d ' ')
fi
if [[ "$broken_links" != "0" ]]; then
warn "Broken skill symlinks detected: $broken_links"
fi
echo "[mosaic-doctor] warnings=$warn_count"
if [[ $FAIL_ON_WARN -eq 1 && $warn_count -gt 0 ]]; then
exit 1
fi